HGVS-compliant variant descriptions

(alignment method = splign)

Type Variant description Links
Transcript (:c.) NM_001166418.1:c.566_570delinsGT
RefSeqGene (:g.) RefSeqGene record not available RefSeqGene record not available
Predicted effect on protein (:p.) NP_001159890.1:p.(Thr189_Pro190delinsSer)
Predicted effect on protein (:p.) NP_001159890.1:p.(T189_P190delinsS)
Variant description Genome Build: Chr: Pos: Ref: Alt Links
NC_000023.10:g.71684476_71684480delinsAC GRCh37:X:71684476:TGGAG:AC
NC_000023.11:g.72464626_72464630delinsAC GRCh38:X:72464626:TGGAG:AC
NW_004070882.1:g.153643_153647delinsAC GRCh37:HG1438_PATCH:153643:TGGAG:AC

Recommended variant descriptions

View recommended variant descriptions in UCSC Genome Browser

  1. We recommend using a genomic and a transcript description in all publications
  2. We currently recommend that RefSeqGene descriptions should be used when possible

Genomic descriptions

Reference sequence type Variant description
RefSeqGene RefSeqGene record not available
Chromosomal GRCh38 NC_000023.11:g.72464626_72464630delinsAC

Transcript description(s)

Reference sequence type Variant description
RefSeq Transcript NM_001166418.1:c.566_570delinsGT

Unable to provide variant descriptions with respect to the RefSeqGene sequence because:

  • No RefSeqGene has been created for the HDAC8 gene;
  • Or, Transcript NM_001166418.1 has not been annotated in the RefSeqGene record for the HDAC8 gene

Transcript-level variants overlapping genome coordinates NC_000023.11:72464626_72464630


Genomic coordinates (VCF) with respect to genome build GRCh38

X-72464626-TGGAG-AC


Aggregated data sources and clinical significance

VariantValidator

Select Genome Build
Alignment method: